Social network analysis

Graphing parameters:

Freeze layout

Display isolates

Layout:

Display node labels

Label offset

Matrix:

Dichotomise at edge value >=:

Include loops

X axis size:

Node colour:

Y axis size:

Node size attribute:

Node size multiplier:

Edge width:

Edge colour:

Clustering coefficient estimated following approach of Turner, et al. (2008) J. Theor. Biol (254), pages 45-54. If clustering coefficient and transitivity are blank there are no dyads.

Frequency table of geodesic distances between reachable pairs of nodes:

Frequency table of weak components, by size:

Sizes of kcores:

kcores are maximal sets such that every set member is tied to at least k others within the set
Sizes of communities:

Degree distribution (total degree):

Davis and Leinhardt Triad Census:

How to cite this page:
A version of this tool is included in the R package incursion . So please cite this page as follows:

Stevenson, M., Sanson, R., Firestone, S. (2015). incursion: Functions for the analysis of infectious disease outbreaks in animal populations. R package version 0.1-16.